The zebrafish erythropoietin:
and biochemical c
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, Nati
nica, 1
iology
20 Jul
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the treatment of peptide-N-glycosidase F (PNGase F). Using the
morpholino approach, we showed that zepo morphants displayed
severe anemia leading to high mortality during development. Such
an effect can be significantly rescued by zepo RNA. Furthermore,
topoietic progenitor cells [2]. Upon binding of Epo to its recep-
N-glycosylation sites by replacing the asparagines (Asn) with
glutamines (Gln) was secreted poorly from COS-1 and CHO
FEBS Letters 581 (2007) 4265–4271
E-mail address: cjibc@gate.sinica.edu.tw (C.-J. Huang).
tor, dimerization of Epor leads to the activation of the JAK/
STAT signaling pathway [3]. The main function of Epo is to
inhibit the apoptosis of erythroid precursor cells and to increase
their survival. Currently, recombinant human Epo (rhEpo) has
been used to treat anemia caused by chronic kidney disease [4].
Moreover, rhEpo is also used to treat cancer patients with ane-
mia induced by chemotherapy or radiotherapy [5].
The first erythropoietin gene from non-mammalian verte-
brate has been cloned from fugu and the encoded protein
shows only 32% identity to human Epo [6]. Human Epo is a
glycoprotein and contains three N-linked sugar chains on
2.2. Total RNA isolation and RT-PCR analysis of zebrafish
erythropoietin mRNA
Total RNA was isolated from the fertilized eggs at different stages
and various tissues of zebrafish (Danio rerio), using the RNAzol
reagent (Tel-Test, Friendswood, TX, USA) according to the instruc-
tions of the manufacturer. After treatment with RQ1 RNase-Free
DNaseI (Promega), 50–100 lg of total RNA was subjected to the first
strand cDNA synthesis. PCR amplifications were performed with zepo
primers (zEPO-RT-F, 5 0-GTG CCT CTC ACT GAG TTC TTG GAA
G-3 0 and zEPO-RT-R, 5 0-CTC GTT CAG CAT GTG TAA GCC
TGA C-3 0) or b-actin primers (zAct-F, 5 0-CCT CCG GTC GTA
CCA CTG GTA T-3 0 and zAct-R, 5 0-CAA CGG AAG GTC TCA
TTG CCG ATC GTG-3 0) and the cDNA as a template.
2.3. Cloning of the full-length cDNAs encoding zEpo and hEpo
The full-length cDNA encoding zEpo was isolated by PCR amplifi-
cation using gene-specific primers (zEPO-F, 5 0-ATG TTT CAC GGT
TCA GGA CTC-3 0; zEPO-R, 5 0-GCT GAC ACC CTG TCG ACA
*Corresponding author. Address: Institute of Biological Chemistry,
Academia Sinica, 128, Sec 2, Academia Road, Taipei 115, Taiwan.
Fax: +886 2 2788 9759.
in the absence of functional zEpo, the expression of specific mark-
ers for adult globin genes, such as aA1- and bA1-globin, but not
the embryonic be1-globin, was affected.
� 2007 Federation of European Biochemical Societies. Published
by Elsevier B.V. All rights reserved.
Keywords: Erythropoietin; Zebrafish; Morpholino
oligonucleotide; Glycoprotein; Secretion; Globin staining
1. Introduction
Erythropoietin (Epo) is a glycoprotein hormone with the
function as a principal regulator of erythropoiesis. In mam-
mals, the initial production organ is liver and is shifted to the
kidney after birth [1]. Effects of Epo are mediated by binding
to Epo receptor (Epor), which is primarily expressed in hema-
Cheng-Ying Chua,b, Chia-Hsiung Chengb, Gen
Kai-Yun Huangb, C
a Graduate Institute of Biochemical Sciences
b Institute of Biological Chemistry, Academia Si
c Institute of Cellular and Organismic B
Received 9 May 2007; revised
Available onli
Edited by M
Abstract In the present study, the zebrafish epo cDNA was
cloned. The encoded protein displays 90%, 55% and 32% identity
to the Epo from carp, fugu and human, respectively. Through RT-
PCR, the expression of zepo mRNA was mainly in the heart and
liver. In the COS-1 cell transfection experiments, the recombinant
zEpo-HA protein was efficiently secreted into the culture medium
as a glycoprotein and the carbohydrate moiety can be cleaved by
0014-5793/$32.00 � 2007 Federation of European Biochemical Societies. Pu
doi:10.1016/j.febslet.2007.07.073
cells [8]. The secretion ability of the fugu Epo in cultured cells
has not been determined yet.
In this study, we isolated a gene encoding zebrafish Epo
(zEpo) that shows 55% and 32% identity to the Epo from fugu
and human, respectively. Unlike the fugu Epo, zEpo contains
two N-glycosylation sites and it was efficiently secreted into the
culture medium as a glycoprotein. Through RT-PCR, the
expression of zepo mRNA was mainly in the heart and liver.
Using morpholino approach, we showed that zEpo morphants
displayed severe anemia leading to high mortality during
development. Furthermore, in the absence of functional zEpo,
the expression of erythroid specific markers, such as adult glo-
bin genes and the embryonic be1-globin gene were examined.
2. Materials and methods
2.1. Fish
Zebrafish were raised and maintained under standard conditions.
Embryos were incubated at 28 �C and the different developmental
stages were determined according to the descriptions in the Zebrafish
Book [9].
Functional identification
haracterization
r Chenb, Yi-Chung Chenb, Chin-Chun Hungb,
ng-Jen Huanga,b,c,*
onal Taiwan University, Taipei 106, Taiwan
28, Sec 2, Academia Road, Taipei 115, Taiwan
, Academia Sinica, Taipei 115, Taiwan
y 2007; accepted 30 July 2007
August 2007
ki Miyasaka
Asn24, Asn38 and Asn83 as well as one O-linked sugar on
Ser126 [7]. The fugu Epo has no N-linked glycosylation site,
but it is postulated to have an O-linked glycosylation site on
Ser117 [6]. Site-directed mutagenesis analysis has indicated
that the rhEpo variant with either a double mutation
(Gln38,83) or a triple mutation (Gln24,38,83) on the three
blished by Elsevier B.V. All rights reserved.
pattern is consistent with that of fugu epo mRNA, which is
predominantly expressed in heart and moderate in liver and
4266 C.-Y. Chu et al. / FEBS Letters 581 (2007) 4265–4271
GAC-3 0) according to the sequence with GenBank accession number
EF426727. The full-length cDNA encoding hEpo was isolated by
PCR amplification using gene-specific primers (hEPO-F, 5 0-ATG
GGG GTG CAC GAA TGT CCT GCC-3 0; hEPO-R, 5 0-TCT GTC
CCC TGT CCT GCA GGC CTC-3 0) according to the sequence with
GenBank accession number NM000799 from human kidney tissue
cDNA. The cDNA encoding zEpo or hEpo was subcloned into the
BamHI and EcoRI site of pHA-YUN vector [10] to generate
pCMV-zEpo-HA or pCMV-hEpo-HA, respectively. The plasmid
pCMV-GFP-HA [10] was constructed by inserting the green fluores-
cence protein (GFP) coding region into pHA-YUN.
2.4. Cell cultures
Monkey kidney fibroblast COS-1 cells were cultured in high-glucose
Dulbecco’s modified Eagle’s medium, supplemented with 10% fetal
bovine serum (HyClone, UT, USA) in a humidified atmosphere of
5% CO2 at 37 �C. Cell transfection was carried out using Lipofect-
amine Plus reagent (Life Technologies) according to the manufac-
turer’s protocol. After transfection for 12 h, cells were incubated in
serum-free medium for an additional 36 h. Conditioned media were
then collected and concentrated with YM-10 MW Centricon (Milli-
pore, Bedford, MA). The concentrated supernatant was digested with
1 U of peptide N-glycosidase F (PNGase F) (Roche) at 37 �C for 18 h.
Untreated and N-glycosidase-treated culture supernatants were ana-
lyzed by SDS–PAGE followed by detection with Western blotting.
2.5. Western blot and immunocytochemistry assay
Cells were harvested at 48 h post-transfection for Western blot and
at 24 h post-transfection for immunocytochemistry analysis. Western
blot analyses were performed with anti-HA monoclonal antibody
(1:3000; Santa Cruz, CA) at 4 �C overnight. The signals were detected
using enhanced chemiluminescence (ECL) (NEN Life Science Prod-
ucts, MA). For immunocytochemistry analysis, cells were fixed with
4% paraformaldehyde and permeabilized in 0.1% Triton X-100. Immu-
nostaining was performed using anti-HA antibody (1:1000) at 4 �C
overnight, followed by Cy3-conjugated goat anti-mouse antibody
and co-stained with DAPI for 30 min at room temperature. Photo-
images were prepared by using a laser scanning confocal microscope
(LSM 510 Meta, Carl Zeiss Inc., Germany).
2.6. Morpholino injection
Antisense morpholinos (MOs) were synthesized by Gene Tools
(Philomath, OR, USA). The sequence of zepo-MO was as follows:
5 0-TGA AAC ATT CGC AAA ACA ACT TGG C-3 0. The MO was
dissolved in 1 · Danieau solution containing 0.5% phenol red to
0.3 mM and 3.2 ng per embryo was injected into embryos at the 1–2
cell stage. The embryos were processed for whole-mount in situ hybrid-
ization at 24 hpf or o-dianisidine staining at 48 hpf.
2.7. Morpholino rescue experiment by mRNA injection
Capped zepo sense RNA was synthesized with the mMESSAGE
mMACHINE T7 Ultra kit (Ambion, Austin, USA) according to the
manufacturer’s protocol from linearized pT7TS plasmids containing
the entire coding region of zepo cDNA. Ten picograms to 30 pg of
sense zepo RNA was co-injected with 3.2 ng zEpo-MO per embryo
at 1–2 cell stage.
2.8. o-Dianisidine staining
MO-injected or uninjected embryos at 48 hpf were dechorionated
and fixed with 4% paraformaldehyde overnight. Fixed embryos were
washed in PBS for three times and then incubated in the staining buffer
(0.6 mg/mL o-dianisidine, 10 mM sodium acetate (pH 5.2), 0.65%
hydrogen peroxide, and 40% ethanol) for 15 min in the dark.
2.9. Whole-mount in situ hybridization
Digoxigenin-labeled antisense RNA probes were generated by
in vitro transcription using linearized plasmids as template. Whole-
mount in situ hybridization were performed as previously described
[10]. Specific primers for epo (5 0-GTG CCT CTC ACT GAG TTC
TTG GAA G-3 0 and 5 0-CTC GTT CAG CAT GTG TAA GCC
TGA C-3 0), gata1 (5 0-ACC TGA GGC TCG TGA ATG TG-3 0 and
5 0-GCT CAT CTG GAG GTG CCA TGT-3 0), scl (5 0-TCC TAG
CAA TCG AGT CAA GCG-30 and 5 0-TGG ACT CCA CTG ATG
brain [6]. During development, the zepo transcript was
detected in all stages (Fig. 2B).
We also examined the temporal and spatial patterns of zepo
mRNA expression using whole-mount in situ hybridization. In
24, 48, 72, 96 and 120 hpf embryos (Fig. 2C), zepo mRNA was
expressed in forebrain, midbrain, hindbrain and brachial arch.
ited in GenBank with the accession number of EF426727. To
determine the genomic structure of zebrafish erythropoietin
(zepo) gene, we used this cDNA as a bait to perform an online
BLAST search of the GenBank database and matched five non-
contiguous regions in the 200556 bp zebrafish BAC clone
DKEY-46E6. Subsequently, we compared the sequences be-
tween this BAC clone and the zepo cDNA. The result indicates
that the epo cDNA is contained within five putative exons and
four introns spanning approximately 13.4 kb.
The deduced protein sequences were aligned with other fish
Erythropoietins and mammalian Erythropoietins. The zEpo
shows an overall identity of 90%, 55%, 32% and 35% to Epo
from carp, Fugu, human and mouse, respectively (Fig. 1B).
In a previous report, Fugu Epo also shows 32% identity to
human Epo [6]. The signal peptide of human Epo has been
assigned [7] and the corresponding regions of zEpo were also
predicted (Fig. 1B). There are four cysteine residues in mature
human Epo that form two disulphide bridges important for the
stability and function of the mature protein [11]. These cys-
teine residues are conserved in all fish Erythropoietins
(Fig. 1B). Moreover, human Epo is a glycoprotein and con-
tains three N-linked sugar chains on Asn24, Asn38 and
Asn83 [7]. Similarly, the zEpo contains two N-linked glycosyl-
ation sites, 38NVT and 81NQT.
3.2. Expression profiles of zepo transcript in different
developmental stages and adult tissues in zebrafish
To investigate the expression pattern of zepo transcript, zeb-
rafish embryos at different developmental stages and various
tissues from adult zebrafish were collected for cDNA prepara-
tion and subjected to RT-PCR. In adult zebrafish, the epo
mRNA is predominantly expressed in the heart and liver, while
low expression is observed in the brain, gill, eye, intestine and
kidney (Fig. 2A). On the contrary, the kidney is the primary
organ to synthesize Epo in adult mammals [1]. This expression
AGT CCT G-3 0), be1-globin (5 0-ACA TGG TTG TGT GGA CAG
ACT TCG AG-30 and 5 0-TTA GTG GTA CTG TCT TCC CAG
AGC GG-3 0), aA1-globin (5 0-ACG CAG CGA TGA GTC TCT
CTG ATA C-3 0 and 5 0-GCA CAG TGT TGT TGT CAG TGA
ATA T-3 0) and bA1-globin (5 0-ACA TGG TTG AGT GGA CAG
ATG CCG-3 0 and 5 0-CAT TGG CGA TGA GAC TCT AGT GGT-
3 0) were used to amplify the DNA as template.
3. Results
3.1. Cloning of the erythropoietin gene from zebrafish
To identify zebrafish cDNA related to Fugu epo, we used the
coding region of the Fugu epo (GenBank accession number
AY303753) to search the GenBank for related expression
sequence tag (EST) sequences by using the program tBLAST.
Two zebrafish EST clones (GenBank accession numbers
DN903417 and EB886593) were found and assembled to
obtain the full-length cDNA. Their sequences have been depos-
C.-Y. Chu et al. / FEBS Letters 581 (2007) 4265–4271 4267
zEpo
5896 bp
I
zEpo
CcEpo
TrEpo
hEpo
mEpo
A
B
In addition, zepo transcript was detected in early embryos at 12
hpf.
3.3. Secretion of zebrafish Epo in COS-1 cells
Epo is a secreted glycoprotein and the signal peptide of
human Epo has been assigned [7]. The putative signal peptide
of zEpo contains 23 amino acid residues and those of human
and mouse Epo have 27 amino acid residues. Interestingly,
eight amino acids of the N-terminal 12 amino acids, AP-
PRLICDSRVL, of mature human Epo are highly conserved
between fish and mammalian Erythropoietins.
In order to confirm the secretion ability of zEpo, a HA-tag
was added to the C-terminal end of zEpo. At 48 h post-trans-
fection of pCMV-zEpo-HA into COS-1 cells, the fusion pro-
tein in cell lysate or conditioned medium was detected by
SDS–PAGE and Western blot analysis using a monoclonal
antibody against HA-tag. As shown in Fig. 3A, the zEpo-
zEpo
CcEpo
TrEpo
hEpo
mEpo
zEpo
CcEpo
TrEpo
hEpo
mEpo
zEpo
CcEpo
TrEpo
hEpo
mEpo
Fig. 1. Genomic organization of the zebrafish erythropoietin gene and alignm
Genomic structure of the zepo gene. Exons are indicated by the boxes num
untranslated regions (open boxes). Introns and the 5 0-flanking regions are ind
mammals using CLUSTAL X: The amino acid sequence of the zebrafish
DQ278877), Fugu (trEpo; AY303753), human (hEpo; NM_000799) and m
highlighted. Signal peptide and putative N-linked glycosylation sites are unde
by arrows.
2052 bp 84 bp 4735 bp
II III IV V
HA was present in both conditioned medium and cell lysate.
The molecular mass of secreted zEpo-HA was reduced when
it was treated with PNGase F, suggesting that this fusion pro-
tein undergoes post-translational modification of glycosyla-
tion. As a positive control, the HA-tagged human Epo was
also expressed in both conditioned medium and cell lysate
and was glycosylated in COS-1 cells.
Due to the properties of secretion and glycosylation, zEpo-
HA and hEpo-HA are expected to be localized in the ER/Gol-
gi. Immunofluorescence studies of COS-1 cells transfected with
pCMV-zEpo-HA using the anti-HA monoclonal antibody re-
vealed that zEpo-HA was localized in the perinuclear region
and displayed a punctate, non-uniform expression pattern,
suggesting that it is localized to ER/Golgi (Fig. 3B). Similarly,
hEpo-HA was localized to ER/Golgi of COS-1 cells as well.
As a control, GFP-HA was localized to the cytosol with a uni-
form distribution.
ent of amino acid sequences of zEpo with Epos from other species. (A)
bered from 1 to 5, including the coding regions (solid boxes) and the
icated by the solid lines. (B) Multiple alignment of Epos from fish and
Epo (zEpo; EF426727) was compared with those from carp (ccEpo;
ouse (mEpo; NM_007942). Identical residues in three proteins are
rlined or overlined. The conserved four cysteine residues are indicated
ount
e use
n situ hybridization with antisense zepo at different developmental stages was
to the left and dorsal to the top. fb, forebrain; mb, midbrain; hb, hindbrain;
4268 C.-Y. Chu et al. / FEBS Letters 581 (2007) 4265–4271
3.4. Knockdown of zepo resulted in strong suppression of
hemoglobin production in zebrafish embryos and reduction
Fig. 2. Expression profiles of zepo mRNA by RT-PCR and by whole-m
pair of primers producing a DNA fragment of 438 bp. b-actin bands wer
and from embryos at different developmental stages (B). Whole-mount i
performed (C). The images were taken from a lateral view, with anterior
ba, brachial arch.
of erythroid-specific gene expression
Morpholino (MO)-mediated knockdown of genes in zebra-
fish embryos has become a routine and efficient method to pro-
vide information about gene function in vivo [12]. To examine
the function of zEpo in the regulation of hemoglobin produc-
tion, we injected zepo-MO into zebrafish embryos at 1–2 cells
stage. In Fig. 4A, the presence of hemoglobin in zebrafish em-
bryos was detected by o-dianisidine staining [13]. Embryos in-
jected with zepo-MO at 48 hpf displayed significant loss of
hemoglobin (panels b and b 0), as compared to that of wild-type
embryos (panels a and a 0). Moreover, the mortality rate of
zepo-MO-injected embryos was very high (80% mortality,
n = 250), possibly due to the significant loss of hemoglobin
and other Epo-responsive effect during development [14]. In
addition, obvious pericardial edema was observed in the
EPO-MO-injected embryos. To test whether zepo RNA can
rescue this defect, we co-injected zepo-MO and zepo RNA into
zebrafish embryos at the one-cell stage. Our results showed
that the mortality rate was reduced to approximately 30%
(n = 150) and zepo RNA-injected embryos displayed obvious
hemoglobins stained by o-dianisidine (panels c and c 0).
To further examine the role of Epo during primitive erythro-
genesis, we analyzed the effect of zepo-MO injection on the
expression of erythroid-specific genes, such as aA1-globin,
bA1-globin, be1-globin, scl and gata1 by whole-mount in situ
hybridization. There are five adult globin genes in zebrafish,
three a-globin, and two b-globin genes [15], while only one
embryonic globin gene has been identified, a b-like globin gene
(be1) [16]. In addition, the stem cell marker scl [17] and the
immature erythroblast marker gata1 [13] were also examined.
As shown in Fig. 4B, there was no difference in the expression
of scl, gata1 and be1-globin in both zepo-MO-injected and
in situ hybridization. RT-PCR of zepo transcript was performed with a
d to normalize the amount of cDNA prepared from different tissues (A)
wild-type embryos at 24 hpf. However, the expression of
aA1-globin and bA1-globin was reduced significantly in zepo-
MO-injected embryos at 24 hpf.
4. Discussion
In this study, the zepo gene and its cDNA were cloned and
characterized. The cDNA encodes a protein of 183 amino
acids, which displays 55% and 32% identity to the fugu Epo
and human Epo. RT-PCR analyses showed that zepo mRNA
was primarily expressed in the heart and liver. Unlike the fugu
Epo, zEpo contains two glycosylation sites and the recombi-
nant zEpo was efficiently secreted into the culture medium as
a glycoprotein. Knockdown of zEpo caused severe anemia
leading to high mortality in zebrafish embryos and the expres-
sions of specific markers for adult globin genes, such as aA1-
globin and bA1-globin, were affected.
The genomic structure of epo genes from human and fugu
have been determined [6]. In this study, the zebrafish epo gene
consists of five exons and four introns spanning approximately
13.4 kb (Fig. 1). For comparison, the human epo gene spans
only about 2.9 kb, while the fugu epo gene spans about
5.9 kb. The first intron of fugu and zebrafish epo gene is
3,105 bp and 5896 bp in length respectively, which is larger
than that of human epo gene for only 584 bp in length. The
second and the last introns of zEPO gene are also large, which
are 2052 bp and 4735 bp in length, compared to those of
human EPO gene with the length of 258 bp